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Fish Ecology Research Lab

Physical Address:
975 W. Sixth Street
Moscow, ID 11111

Mailing Address:
111 Perimeter Drive MS 1136
Moscow, ID 11111-1136

Phone: 111-111-7614

Fax: 111-111-9080

Publications

Journal Articles

In press

 

2019

Snyder MN, Schumaker NH, Ebersole JL, Dunham JB, Comeleo RL, Keefer ML, Leinenbach P, Brookes A, Cope B, Wu J, Palmer J, and Keenan D. 2019. Individual based modeling of fish migration in a 2-D river system: model description and case study. Landscape Ecology 34:737-754.

Keefer ML, Clabough TS, Jepson MA, T Bowerman, and Caudill CC. 2019. Temperature and depth profiles of Chinook salmon and the energetic costs of their long-distance homing migrations. Journal of Thermal Biology 79: 155-165.

2018

Erdman CS, Caudill CC, Naughton GP, and Jepson, MA. 2018. Release of hatchery adult steelhead for angler opportunity increases potential for interactions with endemic steelhead. Ecosphere 9: 1-19.

Keefer ML, Blubaugh TJ, Clabough TS, Jepson MA, Naughton GP, and Caudill CC. 2018. Coho salmon colonization of Oregon's upper Willamette River basinTransactions of the American Fisheries Society 147:1153-1166.

Naughton GP, Keefer ML, Clabough TS, Knoff MJ, Blubaugh TJ, Sharpe C, and Caudill CC. 2018. Reservoir provides cool-water refuge for adult Chinook salmon in a trap-and-haul reintroduction program. Marine and Freshwater Research 69:1995-2007.

Keefer ML, Clabough TS, Jepson MA, Johnson EL, Peery CA, and Caudill CC. 2018. Thermal exposure of adult Chinook salmon and steelhead: Diverse behavioral strategies in a large and warming river system. PLOS ONE https://doi.org/10.1371/journal.pone.0204274.

Naughton GP, Keefer ML, Clabough TS, Knoff MJ, Blubaugh TJ, and Caudill CC. 2018. Tag effects on prespawn mortality of Chinook salmon: a field experiment using passive integrated transponder tags, radio transmitters, and untagged controls. North American Journal of Fisheries Management 38:96-103. 

Bowerman T, Roumasset A, Keefer ML, Sharpe CS, and Caudill CC. 2018. Prespawn mortality of female Chinook salmon increases with water temperature and percent hatchery origin. Transactions of the American Fisheries Society 147:31-42.

Keefer ML, Jepson MA, Clabough TS, Johnson EL, Narum SR, Hess JE, and Caudill CC. 2018. Sea-to-sea survival of late-run adult steelhead (Oncorhynchus mykiss) from the Columbia and Snake rivers. Canadian Journal of Fisheries and Aquatic Sciences 75:331-341.

2017

Crozier LG, Bowerman TE, Burke BJ, Keefer ML, and Caudill CC. 2017. High-stakes steeplechase: a behavior-based model to predict individual travel times through diverse migration segments. Ecosphere 8:1-25.

Kirk MA, Caudill CC, James CS, and Tonina D. 2017. Context-dependent responses to turbulence for an anguilliform swimming fish, Pacific lamprey, during passage of an experimental vertical-slot weir. Ecological Engineering 106:296-307.

Bowerman TE, Pinson-Dumm A, Peery CA, and Caudill CC.2017. Reproductive energy expenditure and changes in body morphology for a population of Chinook salmon Oncorhynchus tshawytscha with a long distance migration. Journal of Fish Biology 90:1960-1979.

Kirk MA, and Caudill CC. 2017. Network analyses reveal intra- and interspecific differences in behavior when passing a complex migration obstacle. Journal of Applied Ecology 54:836-845.

Keefer ML, Jepson MA, Naughton GP, Blubaugh TJ, Clabough TS, and Caudill CC. 2017. Condition-dependent en route migration mortality of adult Chinook salmon in the Willamette River main stem. North American Journal of Fisheries Management 37:370-379.

Keefer ML, Caudill CC, Johnson EL, Clabough TS, Boggs CT, Johnson PN, and Nagy WT. 2017. Inter-observer bias in fish classification and enumeration using Dual-frequency Identification Sonar (DIDSON): a Pacific lamprey case study. Northwest Science 91:41-53.

2016

Kirk MA, Caudill CC, Tonina D., and Syms JC. 2016. Effects of water velocity, turbulence and obstacle length on the swimming capabilities of adult Pacific lampreyFisheries Management and Ecology  23:356-366.

Bowerman T, Keefer ML, and Caudill CC. 2016. Pacific salmon prespawn mortality: patterns, methods, and study design considerations. Fisheries 41:12 738-749 

Keefer ML, and Caudill CC. 2016. Estimating thermal exposure of adult summer steelhead and fall Chinook salmon migrating in a warm impounded riverEcology of Freshwater Fish 25:599-611

Bourret SL, Caudill CC, and Keefer ML. 2016. Diversity of Juvenile Chinook salmon life history pathways. Reviews in Fish Biology and Fisheries 26:375-403-

2015

Benda SE, Naughton GP, Caudill CC, Kent ML, and Shreck CB. 2015. Cool, pathogen-free refuge lowers pathogen-associated prespawn mortality of Willamette River Chinook salmon. Transactions of the American Fisheries Society 144:1159-1172.

Kirk MA, Caudill CC, Johnson EL, Keefer ML and Clabough TS. 2015. Characterization of adult Pacific lamprey swimming behavior in relation to environmental conditions within large-dam fishways. Transactions of the American Fisheries Society 144:998-1012.

McIlraith BJ, Caudill CC, Kennedy BP, Peery CA, and Keefer ML. 2015. Seasonal migration behaviors and distribution of adult Pacific lampreys in unimpounded reaches of the Snake River Basin. North American Journal of Fisheries Management 35:123-134.

Keefer ML, Clabough TS, Jepson MA, Naughton GP, Blubaugh TJ, Joosten DC, and Caudill CC. 2015. Thermal exposure of adult Chinook salmon in the Willamette River basin.  Journal of Thermal Biology 48:11-20

2014

Hess JE, CC Caudill, ML Keefer, BJ McIlratih, ML Moser, and SR Narum. 2014. Genes predict long distance migration and large body size in a migratory fish, Pacific lampreyEvolutionary Applications 7:1192-1111

Bourret SL, BP Kennedy, CC Caudill, and PM Chittaro. 2014. Using otolith chemical and structural analysis to investigate reservoir habitat use by juvenile Chinook salmon Oncorhynchus tshawytscha.  Journal of Fish Biology 85:1507-1525

Keefer ML, CC Caudill and ML Moser. 2014. Fishway Bottleneck Relief Models: a Case Study using Radio-Tagged Pacific Lampreys. Transactions of the American Fisheries Society 143:1049-1060

Caudill, CC, MA Jepson, SR Lee, TL Dick, GP Naughton, and ML Keefer. 2014. A field test of eugenol-based anesthesia versus fish restraint in migrating adult Chinook salmon and steelheadTransactions of the American Fisheries Society 143:856-863

Keefer ML, and CC Caudill. 2014. Homing and straying by anadromous salmonids: a review of mechanisms and rates. Reviews in Fish Biology and Fisheries 24:333-368

Zabel RW, Burke BJ, Moser ML, Caudill CC. 2014. Modeling temporal phenomena in variable environments with parametric models: An application to migrating salmon. Ecological Modelling 273: 23–30

2013

Moser ML, Keefer ML, Caudill CC, Burke BJ. 2013. Migratory behavior of adult Pacific lamprey and evidence for effects of individual temperament on migration rate. Pages 130-149 in H. Ueda, and K. Tsukamoto, editors. Physiology and ecology of fish migration. CRC Press, Boca Raton, FL.

Caudill CC, Keefer ML, Clabough TS, Naughton GP, Burke BJ, Peery CP. 2013. Indirect Effects of Impoundment on Migrating Fish: Temperature Gradients in Fish Ladders Slow Dam Passage by Adult Chinook Salmon and Steelhead. PLOS ONE 8:1-13

Keefer ML, Caudill CC, Clabough TS, Jepson MA, Johnson EL, Peery CA, Higgs MD, Moser ML. 2013. Fishway passage bottleneck identification and prioritization: a case study of Pacific lamprey at Bonneville Dam . Canadian Journal of Fisheries and Aquatic Sciences 70:1551-1565

Keefer ML, Caudill CC, Peery CA, Moser ML. 2013. Context-dependent diel behavior of upstream-migrating anadromous fishes. Environmental Biology of Fishes 96:691-700

Keefer ML, Taylor GA, Garletts DF, Helms C, Gauthier GA, Pierce TM, Caudill CC. 2013. High-head dams affect downstream fish passage timing and survival in the Middle Fork Willamette River. River Research and Applications 29:483-492

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2013. Ecology of Freshwater Fish 22:1-10

2012

Keefer ML, Stansell RJ, Tackley SC, Nagy WT, Gibbons KM, Peery CA, Caudill CC. 2012.Transactions of the American Fisheries Society 141:1236-1251

Clabough TS, Keefer ML, Caudill CC, Johnson EL, Peery CA. 2012. North American Journal of Fisheries Management 32:687-695

Hyun S-Y, Keefer ML, Jepson MA, Caudill CC, Fryer JK, Sharma R, Whiteaker JM, Naughton GP. 2012. Fisheries Research 129-130:82-93

Johnson EL, Caudill CC, Keefer ML, Clabough TS, Peery CA, Jepson MA, Moser ML. 2012. Transactions of the American Fisheries Society 141:571-579

Keefer ML, Taylor GA, Garletts DF, Helms C, Gauthier GA, Pierce TM, Caudill CC. 2012. Ecology of Freshwater Fish: 21:222-234 

2011

Naughton GP, Keefer ML, Clabough TS, Jepson MA, Lee SR, Peery CA, Caudill CC. 2011. Canadian Journal of Fisheries and Aquatic Sciences. 68:1615-1624

Moser ML, Keefer ML, Pennington HT, Ogden DA, Simonson JE. 2011. Fisheries Management and Ecology 18:190-200

Keefer ML, Peery CA, Lee SR, Daigle WR, Johnson EL, Moser ML. 2011. Fisheries Management and Ecology 18:177-189

2010

Griffith DW, Peery CA, Daigle WR, Keefer ML, Wright N. 2010. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 2:299-303

Keefer ML, Taylor GA, Garletts DF, Gauthier GA, Pierce TM, Caudill CC. 2010. Ecology of Freshwater Fish 19:361-372

Johnson EL, Clabough TS, Caudill CC, Keefer ML, Peery CA, Richmond MC. 2010. Journal of Fish Biology 76:1520-1528

Keefer ML, Daigle WR, Peery CA, Pennington HT, Lee SR, Moser ML. 2010. North American Journal of Fisheries Management 30:376-385

Jepson MA, Keefer ML, Naughton GP, Peery CA, Burke BJ. 2010. North American Journal of Fisheries Management 30:72-88

2009

Naughton GP, Jepson MA, Peery CA, Brun CV, Graham JC. 2009. North American Journal of Fisheries Management 29:1511-1518

Keefer ML, Peery CA, High B. 2009. Canadian Journal of Fisheries and Aquatic Sciences 66: 1734-1747

Keefer ML, Moser ML, Boggs CT, Daigle WR, Peery CA. 2009. North American Journal of Fisheries Management 29:1214-1224

Keefer ML, Moser ML, Boggs CT, Daigle WR, Peery CA. 2009. Environmental Biology of Fishes 85:253-264

2008

Keefer ML, Caudill CC, Peery CA, Lee SR. 2008. Ecological Applications 18:1888-1900

Evans AF, Wertheimer RH, Keefer ML, Boggs CT, Peery CA, Collis K. 2008. North American Journal of Fisheries Management 28:1818-1827

Keefer ML, Wertheimer RH, Evans AF, Boggs CT, Peery CA. 2008. Canadian Journal of Fisheries and Aquatic Sciences 65:2592-2605

Keefer ML, Peery CA, Wright N, Daigle WR, Caudill CC, Clabough TS, Griffith DW, Zacharias MA. 2008. Estuarine, Coastal and Shelf Science 78:89-106

Keefer ML, Peery CA, Caudill CC. 2008. Transactions of the American Fisheries Society 137:1120-1133

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2008. North American Journal of Fisheries Management 28:81-96

Keefer ML, Peery CA, Heinrich MJ. 2008. Ecology of Freshwater Fish 17:136-145

Keefer ML, Caudill CC, Peery CA, Boggs CT. 2008. Journal of Fish Biology 72:27-44

2007

Parsley MJ, Wright CD, van der Leeuw BK, Kofoot EE, Peery CA, Moser ML. 2007. Journal of Applied Ichthyology 23:627-635

Johnson EL, Clabough TS, Peery CA, Bennett DH, Bjornn TC, Caudill CC, Richmond MC. 2007. River Research and Applications 23:963-978

Caudill CC, Daigle WR, Keefer ML, Boggs CT, Jepson MA, Burke BJ, Zabel RW, Bjornn TC, Peery CA. 2007. Canadian Journal of Fisheries and Aquatic Sciences 64:979-995

Naughton GP, Caudill CC, Peery CA, Clabough TS, Jepson MA, Bjornn TC, Stuehrenberg LC. 2007. River Research and Applications 23:99-111

Parker, JD, Caudill CC, Hay ME. 2007. Beaver herbivory on aquatic plants. Oecologia 151:616-625

2006

Burke BJ, Jepson MA. 2006. Performance of passive integrated transponder tags and radio tags in determining dam passage behavior of adult Chinook salmon and steelhead. North American Journal of Fisheries Management 26:742-752

Keefer ML, Caudill CC, Peery CA, Bjornn TC. 2006. Canadian Journal of Fisheries and Aquatic Sciences 63:1752-1762

Goniea TM, Keefer ML, Bjornn TC, Peery CA, Bennett DH, Stuehrenberg LC. 2006. Transactions of the American Fisheries Society 135:408-419

Naughton GP, Caudill CC, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2006. North American Journal of Fisheries Management 26:380-390

Keefer ML, Peery CA, Caudill CC. 2006. Journal of Fish Biology 68:944-950

High B, Peery CA, Bennett DH. 2006. Transactions of the American Fisheries Society 135:519-528

2005

Keefer ML, Peery CA, Daigle WR, Jepson MA, Lee SR, Boggs CT, Tolotti KR, Burke BJ. 2005. Canadian Journal of Fisheries and Aquatic Sciences 62:930-949

Naughton GP, Caudill CC, Keefer ML, Bjornn TC, Stuehrenberg LC, Peery CA. 2005. Canadian Journal of Fisheries and Aquatic Sciences 62:30-47

Johnson EL, Clabough TS, Bennett DH, Bjornn TC, Peery CA, Caudill CC, Stuehrenberg LC. 2005. Transactions of the American Fisheries Society 134:1213-1227

2004

Boggs CT, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2004. Fallback, reascension, and adjusted fishway escapement estimates for adult chinook salmon and steelhead at Columbia and Snake River dams . Transactions of the American Fisheries Society 133:932-949

Keefer ML, Peery CA, Bjornn TC, Jepson MA, Stuehrenberg LC. 2004.  Transactions of the American Fisheries Society 133:1413-1439

Peery CA, Bjornn TC. 2004. Fisheries Research 66:311-324

Keefer ML, Peery CA, Ringe RR, Bjornn TC. 2004. North American Journal of Fisheries Management 24:47-54

Keefer ML, Peery CA, Jepson MA, Tolotti KR, Stuehrenberg LC. 2004. North American Journal of Fisheries Management 24:1145-1162

Keefer ML, Peery CA, Jepson MA, Stuehrenberg LC. 2004. Journal of Fish Biology 65:1126-1141

2003

Peery CA, Kavanagh KL, Scott JM. 2003. Bioscience 53:622-623

Reischel TS, Bjornn TC. 2003. North American Journal of Fisheries Management 23:1215-1224

2000

Peery CA, Bjornn TC. 2000. North American Journal of Fisheries Management 20:19-27

Chinook salmon

Keefer ML, Stansell RJ, Tackley SC, Nagy WT, Gibbons KM, Peery CA, Caudill CC. 2012. Transactions of the American Fisheries Society, 141:5, 1236-1251

Hyun S-Y, Keefer ML, Jepson MA, Caudill CC, Fryer JK, Sharma R, Whiteaker JM, Naughton GP. 2012. . Fisheries Research 129-130:82-93

Keefer ML, Taylor GA, Garletts DF, Helms C, Gauthier GA, Pierce TM, Caudill CC. 2012. . Ecology of Freshwater Fish: 21:222-234

Naughton GP, Keefer ML, Clabough TS, Jepson MA, Lee SR, Peery CA, Caudill CC. 2011. . Canadian Journal of Fisheries and Aquatic Sciences. 68:1615-1624

Keefer ML, Taylor GA, Garletts DF, Gauthier GA, Pierce TM, Caudill CC. 2010. . Ecology of Freshwater Fish 19:361-372

Jepson MA, Keefer ML, Naughton GP, Peery CA, Burke BJ. 2010. North American Journal of Fisheries Management 30:72-88

Naughton GP, Jepson MA, Peery CA, Brun CV, Graham JC. 2009. . North American Journal of Fisheries Management 29:1511-1518

Keefer ML, Caudill CC, Peery CA, Lee SR. 2008. Ecological Applications 18:1888-1900

Keefer ML, Peery CA, Caudill CC. 2008. Transactions of the American Fisheries Society 137:1120-1133

Keefer ML, Caudill CC, Peery CA, Boggs CT. 2008. Journal of Fish Biology 72:27-44

Johnson EL, Clabough TS, Peery CA, Bennett DH, Bjornn TC, Caudill CC, Richmond MC. 2007. River Research and Applications 23:963-978

Caudill CC, Daigle WR, Keefer ML, Boggs CT, Jepson MA, Burke BJ, Zabel RW, Bjornn TC, Peery CA. 2007.  Canadian Journal of Fisheries and Aquatic Sciences 64:979-995

Naughton GP, Caudill CC, Peery CA, Clabough TS, Jepson MA, Bjornn TC, Stuehrenberg LC. 2007. River Research and Applications 23:99-111

Burke BJ, Jepson MA. 2006. Performance of passive integrated transponder tags and radio tags in determining dam passage behavior of adult Chinook salmon and steelhead. North American Journal of Fisheries Management 26:742-752

Keefer ML, Caudill CC, Peery CA, Bjornn TC. 2006. . Canadian Journal of Fisheries and Aquatic Sciences 63:1752-1762

 Goniea TM, Keefer ML, Bjornn TC, Peery CA, Bennett DH, Stuehrenberg LC. 2006. Behavioral thermoregulation and slowed migration by adult fall Chinook salmon in response to high Columbia River water temperatures. Transactions of the American Fisheries Society 135:408-419

Keefer ML, Peery CA, Caudill CC. 2006. Journal of Fish Biology 68:944-950

Keefer ML, Peery CA, Daigle WR, Jepson MA, Lee SR, Boggs CT, Tolotti KR, Burke BJ. 2005. . Canadian Journal of Fisheries and Aquatic Sciences 62:930-949

Johnson EL, Clabough TS, Bennett DH, Bjornn TC, Peery CA, Caudill CC, Stuehrenberg LC. 2005. . Transactions of the American Fisheries Society 134:1213-1227

Boggs CT, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2004. Transactions of the American Fisheries Society 133:932-949

Keefer ML, Peery CA, Bjornn TC, Jepson MA, Stuehrenberg LC. 2004. . Transactions of the American Fisheries Society 133:1413-1439

Peery CA, Bjornn TC. 2004. . Fisheries Research 66:311-324

Keefer ML, Peery CA, Ringe RR, Bjornn TC. 2004. North American Journal of Fisheries Management 24:47-54

Keefer ML, Peery CA, Jepson MA, Tolotti KR, Stuehrenberg LC. 2004. .  North American Journal of Fisheries Management 24:1145-1162

Keefer ML, Peery CA, Jepson MA, Stuehrenberg LC. 2004. .  Journal of Fish Biology 65:1126-1141

Reischel TS, Bjornn TC. 2003. I. North American Journal of Fisheries Management 23:1215-1224

Peery CA, Bjornn TC. 2000. . North American Journal of Fisheries Management 20:19-27

Sockeye salmon

Keefer ML, Peery CA, Heinrich MJ. 2008. Ecology of Freshwater Fish 17:136-145

Naughton GP, Caudill CC, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2006. Fallback by adult sockeye salmon at Columbia River dams. North American Journal of Fisheries Management 26:380-390

Naughton GP, Caudill CC, Keefer ML, Bjornn TC, Stuehrenberg LC, Peery CA. 2005. Late-season mortality during migration of radio-tagged sockeye salmon (Oncorhynchus nerka) in the Columbia River. Canadian Journal of Fisheries and Aquatic Sciences 62:30-47

Reischel TS, Bjornn TC. 2003. . North American Journal of Fisheries Management 23:1215-1224

Steelhead

Naughton GP, Keefer ML, Clabough TS, Jepson MA, Lee SR, Peery CA, Caudill CC. 2011. . Canadian Journal of Fisheries and Aquatic Sciences. 68:1615-1624

Johnson EL, Clabough TS, Caudill CC, Keefer ML, Peery CA, Richmond MC. 2010. Journal of Fish Biology 76:1520-1528

Keefer ML, Peery CA, High B. 2009. Canadian Journal of Fisheries and Aquatic Sciences 66: 1734-1747

Keefer ML, Caudill CC, Peery CA, Lee SR. 2008. Ecological Applications 18:1888-1900

Evans AF, Wertheimer RH, Keefer ML, Boggs CT, Peery CA, Collis K. 2008. North American Journal of Fisheries Management 28:1818-1827 

Keefer ML, Wertheimer RH, Evans AF, Boggs CT, Peery CA. 2008. Canadian Journal of Fisheries and Aquatic Sciences 65:2592-2605

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2008. North American Journal of Fisheries Management 28:81-96

Caudill CC, Daigle WR, Keefer ML, Boggs CT, Jepson MA, Burke BJ, Zabel RW, Bjornn TC, Peery CA. 2007. Canadian Journal of Fisheries and Aquatic Sciences 64:979-995

Naughton GP, Caudill CC, Peery CA, Clabough TS, Jepson MA, Bjornn TC, 2007.Stuehrenberg LC.  River Research and Applications 23:99-111

Burke BJ, Jepson MA. 2006. Performance of passive integrated transponder tags and radio tags in determining dam passage behavior of adult Chinook salmon and steelhead.  North American Journal of Fisheries Management 26:742-752

High B, Peery CA, Bennett DH. 2006. . Transactions of the American Fisheries Society 135:519-528

Keefer ML, Peery CA, Daigle WR, Jepson MA, Lee SR, Boggs CT, Tolotti KR, Burke BJ. 2005. .Canadian Journal of Fisheries and Aquatic Sciences 62:930-949

Boggs CT, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2004. Fallback, reascension, and adjusted fishway escapement estimates for adult chinook salmon and steelhead at Columbia and Snake River dams. Transactions of the American Fisheries Society 133:932-949

Keefer ML, Peery CA, Bjornn TC, Jepson MA, Stuehrenberg LC. 2004. .Transactions of the American Fisheries Society 133:1413-1439

Keefer ML, Peery CA, Ringe RR, Bjornn TC. 2004. North American Journal of Fisheries Management 24:47-54

Pacific lamprey

Keefer ML, Caudill CC, Clabough TS, Jepson MA, Johnson EL, Peery CA, Higgs MD, Moser ML. 2013. Fishway passage bottleneck identification and prioritization: a case study of Pacific lamprey at Bonneville Dam[U1] . Canadian Journal of Fisheries and Aquatic Sciences 70:1551-1565

Keefer ML, Caudill CC, Peery CA, Moser ML. 2013. Context-dependent diel behavior of upstream-migrating anadromous fishes. [U2] Environmental Biology of Fishes 96:691-700

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2013. Ecology of Freshwater Fish 2013: 22:1-10

Clabough TS, Keefer ML, Caudill CC, Johnson EL, Peery CA. 2012. North American Journal of Fisheries Management 32:687-695

Johnson EL, Caudill CC, Keefer ML, Clabough TS, Peery CA, Jepson MA, Moser ML. 2012.  Transactions of the American Fisheries Society 141:571-579

Moser ML, Keefer ML, Pennington HT, Ogden DA, Simonson JE. 2011. . Fisheries Management and Ecology 18:190-200 

Keefer ML, Peery CA, Lee SR, Daigle WR, Johnson EL, Moser ML. 2011. .  Fisheries Management and Ecology 18:177-189

Keefer ML, Daigle WR, Peery CA, Pennington HT, Lee SR, Moser ML. 2010. .  North American Journal of Fisheries Management 30:376-385 

Keefer ML, Moser ML, Boggs CT, Daigle WR, Peery CA. 2009. North American Journal of Fisheries Management 29:1214-1224

Keefer ML, Moser ML, Boggs CT, Daigle WR, Peery CA. 2009. Environmental Biology of Fishes 85:253-264

White sturgeon

Parsley MJ, Wright CD, van der Leeuw BK, Kofoot EE, Peery CA, Moser ML. 2007. . Journal of Applied Ichthyology 23:627-635

Sea lions

Keefer ML, Stansell RJ, Tackley SC, Nagy WT, Gibbons KM, Peery CA, Caudill CC. 2012. Transactions of the American Fisheries Society 141:1236-1251

Naughton GP, Keefer ML, Clabough TS, Jepson MA, Lee SR, Peery CA, Caudill CC. 2011. . Canadian Journal of Fisheries and Aquatic Sciences. 68:1615-1624

Multi-species

Keefer ML, Taylor GA, Garletts DF, Helms C, Gauthier GA, Pierce TM, Caudill CC. 2013. High-head dams affect downstream fish passage timing and survival in the Middle Fork Willamette River[U3] . River Research and Applications 29:483-492

Caudill CC, Daigle WR, Keefer ML, Boggs CT, Jepson MA, Burke BJ, Zabel RW, Bjornn TC, Peery CA. 2007.  Canadian Journal of Fisheries and Aquatic Sciences 64:979-995

Naughton GP, Caudill CC, Peery CA, Clabough TS, Jepson MA, Bjornn TC, Stuehrenberg LC. 2007. Experimental evaluation of fishway modifications on passage behaviour of adult Chinook salmon and steelhead at Lower Granite dam, Snake River, USA. River Research and Applications 23:99-111

Burke BJ, Jepson MA. 2006. Performance of passive integrated transponder tags and radio tags in determining dam passage behavior of adult Chinook salmon and steelhead.  North American Journal of Fisheries Management 26:742-752

Boggs CT, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2004. Transactions of the American Fisheries Society 133:932-949

Keefer ML, Peery CA, Bjornn TC, Jepson MA, Stuehrenberg LC. 2004. . Transactions of the American Fisheries Society 133:1413-1439

Keefer ML, Peery CA, Ringe RR, Bjornn TC. 2004. North American Journal of Fisheries Management 24:47-54

Peery CA, Kavanagh KL, Scott JM. 2003. .Bioscience 53:622-623

Reischel TS, Bjornn TC. 2003. North American Journal of Fisheries Management 23:1215-1224

Behavioral thermoregulation

Keefer ML, Peery CA, High B. 2009. Canadian Journal of Fisheries and Aquatic Sciences 66: 1734-1747

Goniea TM, Keefer ML, Bjornn TC, Peery CA, Bennett DH, Stuehrenberg LC. 2006. Transactions of the American Fisheries Society 135:408-419

High B, Peery CA, Bennett DH. 2006. . Transactions of the American Fisheries Society 135:519-528

Escapement

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2013. Ecology of Freshwater Fish 2013: 22:1-10

Hyun S-Y, Keefer ML, Jepson MA, Caudill CC, Fryer JK, Sharma R, Whiteaker JM, Naughton GP. 2012. .  Fisheries Research 129-130:82-93

Naughton GP, Keefer ML, Clabough TS, Jepson MA, Lee SR, Peery CA, Caudill CC. 2011. . Canadian Journal of Fisheries and Aquatic Sciences. 68:1615-1624 

Naughton GP, Jepson MA, Peery CA, Brun CV, Graham JC. 2009. . North American Journal of Fisheries Management 29:1511-1518 

Keefer ML, Caudill CC, Peery CA, Lee SR. 2008. Ecological Applications 18:1888-1900 

Keefer ML, Peery CA, Daigle WR, Jepson MA, Lee SR, Boggs CT, Tolotti KR, Burke BJ. 2005. .Canadian Journal of Fisheries and Aquatic Sciences 62:930-949

Fisheries technology

Clabough TS, Keefer ML, Caudill CC, Johnson EL, Peery CA. 2012. North American Journal of Fisheries Management 32:687-695

Griffith DW, Peery CA, Daigle WR, Keefer ML, Wright N. 2010. . Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 2:299-303

Keefer ML, Peery CA, Wright N, Daigle WR, Caudill CC, Clabough TS, Griffith DW, Zacharias MA. 2008. Estuarine, Coastal and Shelf Science 78:89-106

Burke BJ, Jepson MA. 2006. Performance of passive integrated transponder tags and radio tags in determining dam passage behavior of adult Chinook salmon and steelhead.  North American Journal of Fisheries Management 26:742-752

Keefer ML, Peery CA, Ringe RR, Bjornn TC. 2004. North American Journal of Fisheries Management 24:47-54

Fishways and dams

Keefer ML, Caudill CC, Clabough TS, Jepson MA, Johnson EL, Peery CA, Higgs MD, Moser ML. In press. Fishway passage bottleneck identification and prioritization: a case study of Pacific lamprey at Bonneville Dam[U1] . Canadian Journal of Fisheries and Aquatic Sciences.

Keefer ML, Taylor GA, Garletts DF, Helms C, Gauthier GA, Pierce TM, Caudill CC. 2013. High-head dams affect downstream fish passage timing and survival in the Middle Fork Willamette River[U2] . River Research and Applications 29:483-492

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2013. Ecology of Freshwater Fish 2013: 22:1-10

Clabough TS, Keefer ML, Caudill CC, Johnson EL, Peery CA. 2012. North American Journal of Fisheries Management 32:687-695

Johnson EL, Caudill CC, Keefer ML, Clabough TS, Peery CA, Jepson MA, Moser ML. 2012.  Transactions of the American Fisheries Society 141:571-579

Keefer ML, Taylor GA, Garletts DF, Helms C, Gauthier GA, Pierce TM, Caudill CC. 2012. . Ecology of Freshwater Fish: 21:222-234

Moser ML, Keefer ML, Pennington HT, Ogden DA, Simonson JE. 2011. . Fisheries Management and Ecology 18:190-200

Keefer ML, Peery CA, Lee SR, Daigle WR, Johnson EL, Moser ML. 2011. .  Fisheries Management and Ecology 18:177-189

Johnson EL, Clabough TS, Caudill CC, Keefer ML, Peery CA, Richmond MC. 2010. Journal of Fish Biology 76:1520-1528

Keefer ML, Daigle WR, Peery CA, Pennington HT, Lee SR, Moser ML. 2010. .  North American Journal of Fisheries Management 30:376-385

Parsley MJ, Wright CD, van der Leeuw BK, Kofoot EE, Peery CA, Moser ML. 2007. . Journal of Applied Ichthyology 23:627-635

Johnson EL, Clabough TS, Peery CA, Bennett DH, Bjornn TC, Caudill CC, Richmond MC. 2007. River Research and Applications 23:963-978

Caudill CC, Daigle WR, Keefer ML, Boggs CT, Jepson MA, Burke BJ, Zabel RW, Bjornn TC, Peery CA. 2007.  Canadian Journal of Fisheries and Aquatic Sciences 64:979-995

Naughton GP, Caudill CC, Peery CA, Clabough TS, Jepson MA, Bjornn TC, Stuehrenberg LC. 2007.  River Research and Applications 23:99-111

Naughton GP, Caudill CC, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2006. North American Journal of Fisheries Management 26:380-390

Johnson EL, Clabough TS, Bennett DH, Bjornn TC, Peery CA, Caudill CC, Stuehrenberg LC. 2005. . Transactions of the American Fisheries Society 134:1213-1227

Boggs CT, Keefer ML, Peery CA, Bjornn TC, Stuehrenberg LC. 2004. Fallback, reascension, and adjusted fishway escapement estimates for adult chinook salmon and steelhead at Columbia and Snake River dams. Transactions of the American Fisheries Society 133:932-949

Keefer ML, Peery CA, Bjornn TC, Jepson MA, Stuehrenberg LC. 2004. .Transactions of the American Fisheries Society 133:1413-1439

Reischel TS, Bjornn TC. 2003. . North American Journal of Fisheries Management 23:1215-1224

Homing and straying

Keefer ML, Caudill CC, Peery CA, Lee SR. 2008. Ecological Applications 18:1888-1900

Keefer ML, Caudill CC, Peery CA, Boggs CT. 2008. Journal of Fish Biology 72:27-44

Keefer ML, Caudill CC, Peery CA, Bjornn TC. 2006. . Canadian Journal of Fisheries and Aquatic Sciences 63:1752-1762

Keefer ML, Peery CA, Caudill CC. 2006. Journal of Fish Biology 68:944-950 

High B, Peery CA, Bennett DH. 2006. . Transactions of the American Fisheries Society 135:519-528 

Iteroparity

Evans AF, Wertheimer RH, Keefer ML, Boggs CT, Peery CA, Collis K. 2008. North American Journal of Fisheries Management 28:1818-1827

Keefer ML, Wertheimer RH, Evans AF, Boggs CT, Peery CA. 2008. Canadian Journal of Fisheries and Aquatic Sciences 65:2592-2605

Migration rates 

Keefer ML, Moser ML, Boggs CT, Daigle WR, Peery CA. 2009. North American Journal of Fisheries Management 29:1214-1224

Keefer ML, Peery CA, Bjornn TC, Jepson MA, Stuehrenberg LC. 2004. . Transactions of the American Fisheries Society 133:1413-1439

Keefer ML, Peery CA, Jepson MA, Stuehrenberg LC. 2004. .Journal of Fish Biology 65:1126-1141

Migration timing 

Keefer ML, Caudill CC, Peery CA, Moser ML. 2013. Context-dependent diel behavior of upstream-migrating anadromous fishes. [U3] Environmental Biology of Fishes 96:691-700

Jepson MA, Keefer ML, Naughton GP, Peery CA, Burke BJ. 2010. North American Journal of Fisheries Management 30:72-88

Keefer ML, Moser ML, Boggs CT, Daigle WR, Peery CA. 2009. Environmental Biology of Fishes 85:253-264

Keefer ML, Peery CA, Caudill CC. 2008. Transactions of the American Fisheries Society 137:1120-1133

Keefer ML, Boggs CT, Peery CA, Caudill CC. 2008. North American Journal of Fisheries Management 28:81-96

Keefer ML, Peery CA, Jepson MA, Tolotti KR, Stuehrenberg LC. 2004. . North American Journal of Fisheries Management 24:1145-1162

Predation

Keefer ML, Stansell RJ, Tackley SC, Nagy WT, Gibbons KM, Peery CA, Caudill CC. 2012. Transactions of the American Fisheries Society 14:1236-1251

Naughton GP, Keefer ML, Clabough TS, Jepson MA, Lee SR, Peery CA, Caudill CC. 2011. . Canadian Journal of Fisheries and Aquatic Sciences. 68:1615-1624

Prespawn and en route adult mortality 

Keefer ML, Taylor GA, Garletts DF, Gauthier GA, Pierce TM, Caudill CC. 2010. . Ecology of Freshwater Fish 19:361-372 

Keefer ML, Peery CA, Heinrich MJ. 2008. Ecology of Freshwater Fish 17:136-145 

Naughton GP, Caudill CC, Keefer ML, Bjornn TC, Stuehrenberg LC, Peery CA. 2005. Canadian Journal of Fisheries and Aquatic Sciences 62:30-47

Technical Reports

2019-04 Potential effects of changes to temperature targets in the North Santiam River on adult Chinook salmon behavior and survival

2019-03 Evaluating the influence of past experience on swimming behavior and passage success in adult Pacific lamprey using experimental flumes and accelerometer telemetry, 2018

2019-02 Adult Pacific lamprey migration in the Columbia and Snake rivers: 2018 radiotelemetry and half-duplex PIT tag studies

2019-01 Adult Pacific lamprey passage at the four lower Columbia river dams and lamprey behaviors in relation to nighttime fishway velocity reductions at Bonneville and The Dalles dams and the new UMTJ-LPS at Bonneville Dam - 2018

2018-03 Evaluation of adult Chinook salmon behavior at the Foster Dam adult fish facility and in Foster Dam reservoir on the South Santiam River, 2017

2018-02 Adult salmonid and Pacific lamprey behavior near the new Washington-shore upstream migrant tunnel junction lamprey passage structure (UMTJ-LPS) at Bonneville Dam, 2017

2018-01 Evaluation of the migration behaviors of radio-tagged adult summer steelhead in the Upper-Columbia River, 2015-2016 and 2016-2017


2017-03 Evaluation of adult Chinook salmon behavior at the Foster Dam adult fish facility on the South Santiam River - 2016

2017-02 Migrations of adult salmonids in the federal Columbia River hydrosystem: a summary of radiotelemetry studies, 1996-2014

Appendix A  Generalized FCRPS dam antenna maps
Appendix B  Main stem and tributary antenna maps
Appendix C  Bonneville to John Day antenna photos
Appendix D  McNary to Lower Granite antenna photos
Appendix E  Main stem and tributary antenna photos

2017-01 Assembly and analysis of radiotelemetry and temperature logger data from adult Chinook salmon and steelhead migrating through the Columbia River Basin

Appendix A  Fish origin and final detection locations
Appendix B  Annotated fish thermal histories
Appendix C  Complete DST histories (2000)
Appendix D  Complete DST histories (2002)

2016-03 An Evaluation of temperature and precipitation data for parks of the Mojave Desert Network

2016-02 Migration behavior and spawning success of spring Chinook salmon in Fall Creek, The North Fork Middle Fork Willamette, and the Santiam Rivers: Relationships among fate, fish condition, and environmental factors, 2015

2016-01 Adult steelhead passage behaviors and survival in the Federal Columbia River Power System

2015-15 Overwintering distribution and fallback behavior by adult radio-tagged steelhead in the Federal Columbia River Power System, migration years 2013-2014 and 2014-2015

2015-12 Adult Pacific lamprey migration in the Columbia and Snake Rivers: 2014 radiotelemetry and half-duplex PIT tag studies and retrospective summaries

2015-11-Draft Use of Passage structures at Bonneville and John Day dams by Pacific lamprey, 2013 and 2014

2015-10 Evaluation of adult Pacific lamprey passage at lower Columbia River dams and behavior in relation to fishway modifications at Bonneville and John Day Dams-2014

2015-08 Reach conversion rates of radio-tagged Chinook and sockeye salmon and steelhead in the lower Columbia River, 2013-2014

2015-07 Passage evaluation of radio-tagged Chinook and sockeye salmon after modifications at The Dalles and John Day Dams, 2014

2015-06 Evaluation of salmon passage behavior in relation to fishway modifications at Bonneville Dam-2013-2014

2015-05 Design guidelines for Pacific lamprey passage structures

2015-04 Evaluations of Pacific lamprey swimming behavior and performance in relation to velocity, slot length, and turbulence in vertical slot fishway weirs, 2014

2015-03 Adult Pacific lamprey migration behavior and survival in the Bonneville reservoir and lower Columbia River monitored using the Juvenile Salmonid Acoustic Telemetry System (JSATS), 2011-2014

2015-02 Migration behavior and spawning success of spring Chinook salmon in Fall Creek, the North Fork Middle Fork Willamette and Santiam Rivers: Relationships among fate, fish condition, and environmental factors, 2014.

2015-01 Migratory behavior, run timing, and distribution of radio-tagged adult winter steelhead, summer steelhead, spring Chinook salmon, and coho salmon in the Willamette River: 2011-2014

2014-12 Reach conversion rates of radio-tagged Chinook and sockeye salmon in the lower Columbia River - 2013

2014-11 Passage evaluation of radio-tagged Chinook and sockeye salmon after modifications at The Dalles and John Day Dams – 2013

2014-10 Evaluation of adult salmon passage behavior in relation to fishway modifications at Bonneville Dam – 2013

2014-08 Evaluating Pacific lamprey behavior in fishways at Bonneville and John Day Dams using Dual-Frequency Identification Sonar (DIDSON) – 2013

2014-07 Adult Pacific lamprey migration behavior and escapement in the Bonneville Reservoir and Lower Columbia River monitored using the Juvenile Salmonid Acoustic Telemetry System (JSATS) – 2013

2014-06 Adult Pacific lamprey migration in the Columbia and Snake Rivers: 2013 Half-duplex PIT tag studies - 2013

2014-05 Migration behavior and spawning success of spring Chinook salmon in Fall Creek, The North Fork Middle Fork Willamette and South Santiam Rivers: Relationships among fate, fish condition, and environmental factors - 2013

2014-04 Migratory behavior, run timing, and distribution of radio-tagged adult winter steelhead, summer steelhead, and spring Chinook salmon in the Willamette River - 2013

2014-03 Radio-tagged Chinook salmon and steelhead passage behavior at Lower Monumental, Little Goose, and Lower Granite Dams - 2013

2014-02 PIT-Tagged adult salmon and steelhead conversion from McNary Dam to Lower Granite Dam, 2002-2013

2014-01 Estimating iteroparity in Columbia River steelhead using records archived in the Columbia River PIT tag information system (PTAGIS) database

2013-07 Comparative growth, survival, and life history of reservoir and tributary reared spring chinook salmon in the Willamette River basin:  implications for otolith and scale methodologies.

2013-05 Evaluation of Dual Frequency Identification Sonar (DIDSON) for monitoring Pacific lamprey passage behavior at fishways of Bonneville and John Day Dams, 2012

2013-04 Adult Pacific lamprey migration behavior and escapement in the Bonneville reservoir and lower Columbia River monitored using the Juvenile Salmonid Acoustic Telemetry System (JSATS), 2012

2013-03 Adult Pacific lamprey migration in the lower Columbia River:  2012 half-duplex PIT tag studies

2013-02 Migration behavior and spawning success of spring Chinook salmon in Fall Creek and the North Fork Middle Fork Willamette River:  Relationships among fate, fish condition, and environmental factors, 2012

2013-01 Migratory behavior, run timing, and distribution of radio-tagged adult winter steelhead, summer steelhead, and spring Chinook salmon in the Willamette River – 2012

2012-08 Adult Pacific Lamprey passage: data synthesis and fishway improvement prioritization tools

2012-8 Appendices to Adult Pacific Lamprey passage: data synthesis and fishway improvement prioritization tools

A review of adult salmon and steelhead straying with an emphasis on Columbia River populations

Evaluation of dual frequency identification sonar (Didson) for monitoring Pacific lamprey passage behavior at fishways of Bonneville dam, 2011

Adult Pacific lamprey migration behavior and escapement in the Bonneville reservoir and lower Columbia river monitored using the Juvenile Salmonid Acoustic Telemetry System (JSATS), 2011

 Adult Pacific lamprey migration in the lower Columbia river: 2011 half-duplex pit tag studies

Migration behavior and spawning success of spring Chinook salmon in Fall Creek and the North Fork Middle Fork Willamette River: relationships among fate, fish condition, and environmental factors, 2011

Migratory behavior, run timing, and distribution of radio-tagged adult spring Chinook salmon in the Willamette River - 2011.

Adult Pacific lamprey migration and behavior at McNary dam 2005 – 2010

Migration behavior and spawning success of spring Chinook salmon in Fall creek and the North Fork Middle Fork Willamette river: relationships among fate, fish condition, and environmental factors, 2010

  Evaluation of the Juvenile Salmon Acoustic Telemetry System (JSATS) for monitoring adult Pacific lamprey in the Bonneville reservoir and at Bonneville dam, 2010

General passage and fishway use summaries for adult Pacific lamprey at Bonneville, The Dalles and John Day dams, 2010

  Adult Pacific lamprey migration in the lower Columbia river: 2010 radiotelemetry and half-duplex pit tag studies

  Evaluation of adult Pacific lamprey passage at the Cascades Island fishway after entrance modifications, 2010

2011-02X Draft Downstream fish passage above and below dams in the Middle Fork Willamette River: a multi-year summary

  Behavior of radio-tagged adult spring-summer Chinook salmon at The Dalles dam in relation to spill volume and the presence of the bay 8/9 spill wall and at John Day dam in relation to north shore ladder modifications, 2010

  Passage behavior of adult spring Chinook salmon at Bonneville dam including evaluations of passage at the modified Cascades Island fishway, 2010

Evaluation of factors affecting migration success and spawning distributions of adult Pacific lamprey in the Snake river, Washington and Idaho; a progress report. 2010

Evaluation of radiotelemetry studies of adult spring Chinook salmon and winter steelhead in the Hood river, 2008-2010

2010-09 Analysis of juvenile fall Chinook salmon use of shallow water habitat sites in Snake river reservoirs. 2010

A review of adult salmon and steelhead life history and behavior in the Willamette river basin: Identification of knowledge gaps and research needs

Draft Migration behavior and spawning success of spring Chinook salmon in Fall Creek and the North Fork Middle Fork Willamette river: relationships among fate, fish condition, and environmental factors. 2008-2009

 Evaluation of adult Pacific lamprey migration and behavior at McNary dam with effects of night-time fishway flow reduction, 2009 and detection and behavior of transported adult Pacific lamprey

General passage and fishway use summaries for adult Pacific lamprey at Bonneville, The Dalles and John Day dams, 2009

 Effects of lowered fishway water velocity on fishway entrance success by adult Pacific lamprey at Bonneville dam, 2007-2009

Adult Pacific lamprey migration in the lower Columbia river: 2009 radio-telemetry and half-duplex pit tag studies 2010

 Evaluation of adult Pacific lamprey passage at the Cascade Island fishway after entrance modifications 2009

 Adult Chinook salmon Passage behavior at Bonneville dam in relation to structural modifications made to the Cascade Island fishway 2009

2009

  • Effects of lowered nighttime velocities on fishway entrance success by Pacific lamprey at Bonneville dam and fishway use summaries for lamprey at Bonneville and The Dalles dams, 2008
  • Use of night video to quantify adult lamprey passage at Bonneville and The Dalles dams in 2007-2008
  • Adult Pacific lamprey migration in the lower Columbia river: 2008 radio telemetry and half-duplex PIT tag studies
  • Influence of water temperature on adult salmon and steelhead passage and behavior at Lower Granite dam, 2008
  • Adult Chinook salmon passage at Little Goose dam in relation to spill operations, 2008
  • Evaluation of adult Pacific lamprey migration and behavior at McNary and Ice Harbor dams, 2008
  • Energy use, migration times, and spawning success of adult spring–summer Chinook salmon returning to spawning areas in the South Fork Salmon river in central Idaho, 2002–2007
  • Evaluation of fishway modifications to improve passage of adult chinook salmon and steelhead through the transition pool at Lower Granite dam, 2008
  • Effects of lowered nighttime velocities on fishway entrance success by Pacific lamprey at Bonneville dam and fishway use summaries for lamprey at Bonneville and The Dalles dams, 2007
  • Adult Pacific lamprey migration in the lower Columbia river: 2007 radio telemetry and half-duplex PIT tag studies

2008

  • A multi-year summary of steelhead kelt studies in the Columbia and Snake rivers
  • Evaluation of adult Pacific lamprey passage rates and survival through the lower Columbia river hydrosystem: 2005-2006 PIT-TAG studies
  • A literature review relevant to juvenile fall Chinook salmon habitat use, migration behavior, and survival in the lower Snake River
  • Adult Pacific lamprey bypass structure development: Tests in an experimental fishway, 2004-2006
  • Draft Evaluation of adult Pacific lamprey migration and behavior at McNary and Ice Harbor dams, 2007
  • Direct and indirect effects of barriers to migration - Pacific lamprey at McNary and Ice Harbor dams in the Columbia river basin
  • Behavior and survival of radio-tagged sockeye salmon during adult migration in the Snake and Salmon rivers
  • Adult salmon and steelhead passage through fishways and transition pools at Bonneville dam, 1997-2002
  • Adult salmon and steelhead passage through fishways and transition pools at John Day dam, 1997-2001
  • Body temperature during migration in adult Chinook salmon and steelhead through the lower Columbia and Snake rivers, 2000 and 2002
  • Migration depths of adult Chinook salmon and steelhead in the lower Columbia and Snake rivers in relation to dissolved gas exposure, 2002
  • Migration depths of adult steelhead in the lower Columbia and Snake rivers in relation to dissolved gas exposure, 2000

2007

  • 2007-04 Draft An evaluation of adult Chinook salmon behavior in the presence of pinniped exclusion gates, hazing, and acoustic deterrents at Bonneville Dam, 2005-2006
  • Associations between adult salmon and steelhead body temperature during upstream migration and estimated water temperatures in Lower Granite reservoir during cold water releases from Dworshak reservoir, 2004
  • Adult salmon and steelhead passage through fishways and transition pools at The Dalles dam, 1997-2001
  • Evaluation of fishway modifications to improve passage of adult Chinook salmon and steelhead through the transition pool at Lower Granite dam, 2006

2006

  • 2006-10 Draft Fishway entrance use and passage times of adult spring-summer Chinook salmon at Lower Monumental Dam, with an emphasis on effects of spillway deflectors, 2000-2004
  • 2006-9 Adult Chinook salmon and steelhead passage times and behaviors in the south-shore ladder at John Day Dam, with special reference to ladder modifications: 1996-1998 and 2000-20004
  •  Run-timing, escapement, and estimated harvest of upriver bright fall Chinook salmon in the Columbia river, 1998 and 2000-2005
  • Effects of transport during juvenile migration on behavior and fate of returning adult Chinook salmon and steelhead in the Columbia-Snake hydrosystem, 2000-2003
  • Experimental evaluation of fishway modifications on the passage behavior of adult Chinook salmon and steelhead at Lower Granite dam, Snake river, 2000-2002
  • 2006-05 Adult Chinook salmon and steelhead dam passage behavior in response to manipulated discharge through spillways at Bonneville dam
  • Associations between adult salmon and steelhead body temperature during upstream migration and estimated environmental temperatures in Lower Granite reservoir during cold water releases from Dworshak reservoir, 2001-2002
  • 2006-3 Water temperatures in adult fishways at mainstem dams on the Snake and Columbia rivers: Phase 2 biological effects
  • Non-direct homing by adult spring-summer Chinook salmon: Tributary overshoot, overshoot fallback, and temporary nonnatal tributary use in the Columbia river basin, 1996-2003
  •  An evaluation of adult Chinook salmon and steelhead behavior at the north-shore counting window of Lower Monumental dam using radiotelemetry, 2004

2005

  • 2005-08 Draft Energy use, migration times, and spawning success of adult spring-summer Chinook salmon returning to spawning areas in the South Fork Salmon River in central Idaho, 2002 and 2003
  • Adult steelhead passage through fishways and transition pools at Bonneville, Mcnary and Lower Granite dams, 1996
  • Fallback, reascension and adjusted fishway escapement estimates for adult Chinook salmon and steelhead at Columbia and Snake river dams, 1996-2003
  •  Straying rates of known-origin adult Chinook salmon and steelhead within the Columbia river basin, 2000-2003
  •  Adult salmon and steelhead passage times through hydrosystem and riverine environment
  •  Escapement, harvest, and unaccounted-for loss of radio-tagged adult Chinook salmon and steelhead in the Columbia-Snake river hydrosystem, 1996-2002
  •  Evaluation of adult Pacific lamprey passage and behavior in an experimental fishway at Bonneville dam

2004

  • 2004-11 Draft An evaluation of adult Chinook salmon and steelhead behaviour at counting windows of McNary Dam during 2002 & 2003 and the north shore counting window at Ice Harbor Dam during 2003
  • 2004-10 Migration of Sockeye salmon past Columbia river dams, through reservoirs and distribution into tributaries, 1997
  •  Migration depths of adult spring-summer Chinook salmon in the lower Columbia and Snake rivers in relation to dissolved gas supersaturation
  •  Migration behavior of adult Chinook salmon and steelhead released in the forebay of Bonneville dam, 2000-2001
  •  An evaluation of the effects of spill basin drilling on salmon and steelhead passage at Lower Monumental dam in 2002 using radio telemetry
  •  Adult Chinook salmon and steelhead fallback at Bonneville dam, 2000-2001
  •  Evaluation of fallback of adult salmon and steelhead via juvenile bypass systems at Bonneville, John Day, McNary, and Ice Harbor dams, 2000-2001
  •  An evaluation of adult Chinook salmon and steelhead behavior at counting windows and through vertical-slot weirs of Bonneville dam using radiotelemetry, 2001-2002

2003

  • 2003-06 Draft Temperature influenced migratory behavior and use of thermal refuges by upriver bright fall Chinook salmon, 1998 and 2000
  •  Adult spring and summer Chinook salmon passage through fishways and transition pools at Bonneville, McNary, Ice Harbor
  •  Effects of the shad fishery on passage of adult Chinook salmon through the Oregon-shore fishway ladder at The Dalles Dam 2002
  •  Water temperatures and passage of adult salmon and steelhead in the lower Snake River
  •  Passage of radio-tagged adult salmon and steelhead at John Day dam with the emphasis on fishway temperatures, 1997-1998, 2002
  •  Migration of adult steelhead past Columbia and Snake river dams, through reservoirs and distribution into tributaries, 1996
  •  Water temperatures and passage of adult salmon and steelhead in the lower Snake River

2001

  •  Adult  Chinook salmon and steelhead fallbacks versus spill at Bonneville dam in 2000

2000

  •  Adult Chinook and Sockeye salmon, and steelhead fallback rates at Bonneville dam, 1996-1998

1999-06    Evaluation of running turbine 1 at maximum capacity on passage of adult salmon and steelhead at John Day dam -1997

1999-05    Effects of spill in fall on passage of adult steelhead at John Day dam, 1997

    Effects of a shad fishery on passage of adult Chinook salmon through the Oregon-shore fishway ladder at The Dalles dam -1996

    Distribution and movements of Northern Pikeminnow and Smallmouth bass during operation of a surface-bypass and collection system for juvenile salmonids at Lower Granite dam, 1996-1997

    Radio telemetry assessments of migration patterns and fallbacks of adult salmon and steelhead in the forebay of Bonneville dam, 1997-1998

    Evaluation of adult Chinook and Sockeye salmon at Priest Rapids and Wanapum dams -1997

    Evaluation of  adult Chinook salmon at Priest Rapids dam with orifice gates open and closed

1992-1    A review of literature related to the movements of salmon and steelhead past dams and through reservoirs in the lower Snake River

    Passage of Chinook salmon through the lower Snake River and distribution into the tributaries, 1991-1993

    Migration of adult steelhead past dams and through reservoirs in the lower Snake River and into the tributaries, 1991-1995

    Entrances used and passage through fishways for adult Chinook salmon and steelhead

    Turbine priority and its effects on passage of steelhead at Snake River dams

    Movements of steelhead in fishways in relation to transition pools

    Evaluation of fishway fences (1991-1998) and spill for adult salmon and steelhead passage (1994) at Snake River dams

    Effects of zero versus normal flow at night on passage of steelhead in summer and fall

Contact Us

Fish Ecology Research Lab

Physical Address:
975 W. Sixth Street
Moscow, ID 11111

Mailing Address:
111 Perimeter Drive MS 1136
Moscow, ID 11111-1136

Phone: 111-111-7614

Fax: 111-111-9080

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